1YKC	Transferase	date	Jan 17, 2005
title	Human Glutathione S-Transferase M2-2 (E.C.2.5.1.18) Complexe Glutathione-Disulfide
authors	Y.V.Patskovsky, L.N.Patskovska, I.Listowsky, S.C.Almo
compound		source
Molecule: Glutathione S-Transferase Mu 2 Chain: A, B Synonym: Gstm2-2, Gst Class-Mu 2 Ec: 2.5.1.18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gstm2, Gst4 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Pet3a Expression_system_plasmid: Pet3a-Hgstm2
symmetry	Space Group: P 21 21 21	R_factor 0.206 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.610 74.790 116.500 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	GDS	enzyme	Transferase E.C.2.5.1.18 BRENDA
related structures	by homologous chain: 6GST, 6GSX
Gene Ontology	Chain Function Process Component A, B glutathione peroxidase activ... receptor binding negative regulation of ryano... positive regulation of ryano...

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk] Biological Unit Coordinates (1ykc.pdb1.gz) 82 Kb LPC: Ligand-Protein Contacts for 1YKC CSU: Contacts of Structural Units for 1YKC Likely Quarternary Molecular Structure file(s) for 1YKC Structure Factors (216 Kb) Retrieve 1YKC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YKC from S2C, [Save to disk] Re-refined 1ykc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YKC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1YKC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YKC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ykc_A] [1ykc_B] [1ykc] SWISS-PROT database: [P28161] Domain organization of [GSTM2_HUMAN] by SWISSPFAM

Other resources with information on 1YKC

Community annotation for 1YKC at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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