OCA Atlas for 1YUC

1YUC

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

EPH, GOL

enzyme

related structures

by homologous chain: 1PK5, 1YP0

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Modulation of human nuclear receptor LRH-1 activity by phospholipids and SHP., Ortlund EA, Lee Y, Solomon IH, Hager JM, Safi R, Choi Y, Guan Z, Tripathy A, Raetz CR, McDonnell DP, Moore DD, Redinbo MR, Nat Struct Mol Biol 2005 Feb 22;. PMID:15723037

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]

Biological Unit Coordinates (1yuc.pdb1.gz) 45 Kb

Biological Unit Coordinates (1yuc.pdb2.gz) 45 Kb

Biological Unit Coordinates (1yuc.pdb3.gz) 88 Kb

Biological Unit Coordinates (1yuc.pdb4.gz) 88 Kb

LPC: Ligand-Protein Contacts for 1YUC

CSU: Contacts of Structural Units for 1YUC

Likely Quarternary Molecular Structure file(s) for 1YUC

Structure Factors (581 Kb)

Retrieve 1YUC in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1YUC from S2C, [Save to disk]

Re-refined 1yuc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YUC in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yuc] [1yuc_A] [1yuc_B] [1yuc_C] [1yuc_D]

SWISS-PROT database: [Q15466] [O00482]

Domain found in 1YUC: [HOLI ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]