| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (1475 Kb) [Save to disk]
 - Biological Unit Coordinates (1yuj.pdb1.gz) 29 Kb
- LPC: Ligand-Protein Contacts for 1YUJ
- CSU: Contacts of Structural Units for 1YUJ
- Retrieve 1YUJ in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1YUJ
from S2C,
[Save to disk]
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| View 1YUJ in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
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| Visual 3D analysis of 1YUJ |
- Cartoon
representation from PDB Cartoon
- Ramachandran
plot from PDBSum
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| Structure-derived information |
- Dipole moment, from Dipole Server at Weizmann Institute
- Crystal Contacts, from CryCo at Weizmann Institute
- 3D motif for 1YUJ,
from MSDmotif at EBI
- Genome occurence of
1YUJ's fold
from GeneCensus
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1yuja_, region A
[Jmol]
[rasmolscript]
[script source]
- Fold representative 1yuj from FSSP and Dali (Families of Structurally Similar Proteins)
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
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| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1yuj_A] [1yuj_C] [1yuj] [1yuj_B]
- SWISS-PROT database: [Q08605]
- Domain organization of [GAGA_DROME] by SWISSPFAM
- Domain found in 1YUJ: [ZnF_C2H2
] by SMART
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Other resources with information on 1YUJ |
- Community annotation for 1YUJ at PDBWiki (http://pdbwiki.org)
- NMR Ensemble (OLDERADO: core, domain and representative structure database)
- MMDB (Entrez's Structure Database)
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| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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