1ZP7 Dna Binding Protein date May 16, 2005
title The Structure Of Bacillus Subtilis Recu Holliday Junction Re And Its Role In Substrate Selection And Sequence Specific C
authors N.Mcgregor, S.Ayora, S.Sedelnikova, B.Carrasco, J.C.Alonso, P.Tha J.Rafferty
compound source
Molecule: Recombination Protein U
Chain: A, B
Synonym: Penicillin-Binding Protein-Related Factor A, Pbp R Factor A, Recu
 Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Strain: Plyss
symmetry Space Group: P 65
R_factor 0.217 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.340 74.340 153.466 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.25 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nuclease activity
  • endonuclease activity


    • Primary referenceThe Structure of Bacillus subtilis RecU Holliday Junction Resolvase and Its Role in Substrate Selection and Sequence-Specific Cleavage., McGregor N, Ayora S, Sedelnikova S, Carrasco B, Alonso JC, Thaw P, Rafferty J, Structure (Camb) 2005 Sep;13(9):1341-51. PMID:16154091
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1zp7.pdb1.gz) 54 Kb
  • CSU: Contacts of Structural Units for 1ZP7
  • Likely Quarternary Molecular Structure file(s) for 1ZP7
  • Structure Factors (162 Kb)
  • Retrieve 1ZP7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZP7 from S2C, [Save to disk]
  • Re-refined 1zp7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZP7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZP7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZP7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zp7_A] [1zp7] [1zp7_B]
  • SWISS-PROT database: [P39792]
  • Domain organization of [RECU_BACSU] by SWISSPFAM
    • Other resources with information on 1ZP7
  • Community annotation for 1ZP7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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