2B0C Structural Genomics, Unknown Function date Sep 13, 2005
title The Crystal Structure Of The Putative Phosphatase From Esche Coli
authors R.Zhang, T.Skarina, A.Savchenko, A.Edwards, A.Joachimiak, Midwest For Structural Genomics (Mcsg)
compound source
Molecule: Putative Phosphatase
Chain: A
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Gene: Yihx
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 41 21 2
R_factor 0.201 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.256 62.256 127.038 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand G1P, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • glucose-1-phosphatase activi...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (2b0c.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 2B0C
  • CSU: Contacts of Structural Units for 2B0C
  • Likely Quarternary Molecular Structure file(s) for 2B0C
  • Structure Factors (123 Kb)
  • Retrieve 2B0C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B0C from S2C, [Save to disk]
  • Re-refined 2b0c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2B0C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2B0C
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2B0C, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b0c_A] [2b0c]
  • SWISS-PROT database: [P0A8Y3]
  • Domain organization of [YIHX_ECOLI] by SWISSPFAM
    • Other resources with information on 2B0C
  • Community annotation for 2B0C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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