2BLE Oxidoreductase date Mar 03, 2005
title Structure Of Human Guanosine Monophosphate Reductase Gmpr1 I With Gmp
authors G.Bunkoczi, A.Haroniti, S.Ng, F.Von Delft, U.Oppermann, C.Arrowsm M.Sundstrom, A.Edwards, O.Gileadi
compound source
Molecule: Gmp Reductase I
Chain: A
Synonym: Guanosine 5'-Monophosphate Oxidoreductase 1, Guano Monophosphate Reductase 1;
Ec: 1.7.1.7
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: P 4 21 2
R_factor 0.177 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.780 117.780 54.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 5GP, NA enzyme Oxidoreductase E.C.1.7.1.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2ble.pdb1.gz) 214 Kb
  • LPC: Ligand-Protein Contacts for 2BLE
  • CSU: Contacts of Structural Units for 2BLE
  • Likely Quarternary Molecular Structure file(s) for 2BLE
  • Structure Factors (365 Kb)
  • Retrieve 2BLE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BLE from S2C, [Save to disk]
  • Re-refined 2ble structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BLE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BLE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BLE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ble] [2ble_A]
  • SWISS-PROT database: [P36959]
  • Domain organization of [GMPR1_HUMAN] by SWISSPFAM
  • Domain found in 2BLE: [IMPDH ] by SMART
  • Other resources with information on 2BLE
  • Community annotation for 2BLE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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