2D0O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, MG, SO4 enzyme
note 2D0O is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
C, A


D, B


Primary referenceRelease of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor., Shibata N, Mori K, Hieda N, Higuchi Y, Yamanishi M, Toraya T, Structure. 2005 Dec;13(12):1745-54. PMID:16338403
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (2d0o.pdb1.gz) 228 Kb
  • LPC: Ligand-Protein Contacts for 2D0O
  • CSU: Contacts of Structural Units for 2D0O
  • Likely Quarternary Molecular Structure file(s) for 2D0O
  • Structure Factors (1797 Kb)
  • Retrieve 2D0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D0O from S2C, [Save to disk]
  • Re-refined 2d0o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2D0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d0o] [2d0o_A] [2d0o_B] [2d0o_C] [2d0o_D]
  • SWISS-PROT database: [O68195] [O68196]

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