2DM6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IMN, NAP, TAM enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal structure of anti-configuration of indomethacin and leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complex reveals the structural basis of broad spectrum indomethacin efficacy., Hori T, Ishijima J, Yokomizo T, Ago H, Shimizu T, Miyano M, J Biochem (Tokyo). 2006 Sep;140(3):457-66. Epub 2006 Aug 17. PMID:16916844
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (2dm6.pdb1.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 2DM6
  • CSU: Contacts of Structural Units for 2DM6
  • Likely Quarternary Molecular Structure file(s) for 2DM6
  • Structure Factors (355 Kb)
  • Retrieve 2DM6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DM6 from S2C, [Save to disk]
  • Re-refined 2dm6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DM6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dm6] [2dm6_A] [2dm6_B]
  • SWISS-PROT database: [Q9EQZ5]

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