2JAM Transferase date Nov 29, 2006
title Crystal Structure Of Human Calmodulin-Dependent Protein Kina
authors J.E.Debreczeni, A.Bullock, T.Keates, F.H.Niesen, E.Salah, L.Shres C.Smee, F.Sobott, A.C.W.Pike, G.Bunkoczi, F.Von Delft, A.Turnbul J.Weigelt, C.H.Arrowsmith, A.Edwards, M.Sundstrom, S.Knapp
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type
Chain: A, B
Fragment: Catalytic Domain, Residues 18-316
Synonym: Cam Kinase Ig, Cam Kinase I Gamma, Camki Gamma, Ca Cam-Ki Gamma, Camkig, Camk-Like Creb Kinase III, Click III, Calmodulin-Dependent, Protein, Kinase, I, G;
Ec: 2.7.11.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: R3 Rosetta
Expression_system_vector: Pnic28-Bsa4

Molecule: Polypeptide
Chain: D

Organism_scientific: Unidentified
Organism_taxid: 32644
Other_details: Unknown Origin

Molecule: Polypeptide
Chain: E

Organism_scientific: Unidentified
Organism_taxid: 32644
Other_details: Unknown Origin
symmetry Space Group: P 1
R_factor 0.155 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.666 53.736 64.177 65.45 71.91 73.84
method X-Ray Diffractionresolution 1.70 Å
ligand CA, EDO, J60 enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (2jam.pdb1.gz) 100 Kb
  • Biological Unit Coordinates (2jam.pdb2.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 2JAM
  • CSU: Contacts of Structural Units for 2JAM
  • Likely Quarternary Molecular Structure file(s) for 2JAM
  • Structure Factors (840 Kb)
  • Retrieve 2JAM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JAM from S2C, [Save to disk]
  • Re-refined 2jam structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JAM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JAM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JAM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jam_B] [2jam_D] [2jam_E] [2jam_A] [2jam]
  • SWISS-PROT database: [Q96NX5]
  • Domain organization of [KCC1G_HUMAN] by SWISSPFAM
  • Domain found in 2JAM: [S_TKc ] by SMART
  • Other resources with information on 2JAM
  • Community annotation for 2JAM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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