2JRY Toxin date Jun 29, 2007
title Structure And Sodium Channel Activity Of An Excitatory I1-Su Conotoxin
authors O.Buczek, D.Wei, J.Babon, X.Yang, B.Fiedler, P.Chen, D.Yoshikami, B G.Bulaj, R.Norton
compound source
Molecule: I-Superfamily Conotoxin R11a
Chain: A
Synonym: R11.6
 Organism_scientific: Conus Radiatus
Organism_taxid: 61198
methodSolution NMR
ligand DPN, HYP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceStructure and Sodium Channel Activity of an Excitatory I(1)-Superfamily Conotoxin(,)., Buczek O, Wei D, Babon JJ, Yang X, Fiedler B, Chen P, Yoshikami D, Olivera BM, Bulaj G, Norton RS, Biochemistry. 2007 Sep 4;46(35):9929-9940. Epub 2007 Aug 14. PMID:17696362
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk]
  • Biological Unit Coordinates (2jry.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 2JRY
  • CSU: Contacts of Structural Units for 2JRY
  • Retrieve 2JRY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JRY from S2C, [Save to disk]
    • View 2JRY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JRY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JRY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jry] [2jry_A]
  • SWISS-PROT database: [Q7Z094]
  • Domain organization of [CI1BA_CONRA] by SWISSPFAM
    • Other resources with information on 2JRY
  • Community annotation for 2JRY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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