2QVD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BER	enzyme
Gene Ontology	Chain Function Process Component A toxin activity
Primary reference	Identification of a novel and potent inhibitor of phospholipase A(2) in a medicinal plant: crystal structure at 1.93A and Surface Plasmon Resonance analysis of phospholipase A(2) complexed with berberine., Chandra DN, Prasanth GK, Singh N, Kumar S, Jithesh O, Sadasivan C, Sharma S, Singh TP, Haridas M, Biochim Biophys Acta. 2011 May;1814(5):657-63. Epub 2011 Mar 17. PMID:21420512

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk] Biological Unit Coordinates (2qvd.pdb1.gz) 23 Kb LPC: Ligand-Protein Contacts for 2QVD CSU: Contacts of Structural Units for 2QVD Likely Quarternary Molecular Structure file(s) for 2QVD Structure Factors (153 Kb) Retrieve 2QVD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2QVD from S2C, [Save to disk] Re-refined 2qvd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2QVD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2qvd] [2qvd_A] SWISS-PROT database: [P59071] Domain found in 2QVD: [PA2c ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---