OCA Atlas for 2V0T

2V0T

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

EPE, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
H, C, G, F, A, E, B, D

Primary reference

Structural studies show that the A178L mutation in the C-terminal hinge of the catalytic loop-6 of triosephosphate isomerase (TIM) induces a closed-like conformation in dimeric and monomeric TIM., Alahuhta M, Casteleijn MG, Neubauer P, Wierenga RK, Acta Crystallogr D Biol Crystallogr. 2008 Feb;64(Pt 2):178-88. Epub 2008, Jan 16. PMID:18219118

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (328 Kb) [Save to disk]

Biological Unit Coordinates (2v0t.pdb1.gz) 85 Kb

Biological Unit Coordinates (2v0t.pdb2.gz) 84 Kb

Biological Unit Coordinates (2v0t.pdb3.gz) 84 Kb

Biological Unit Coordinates (2v0t.pdb4.gz) 81 Kb

LPC: Ligand-Protein Contacts for 2V0T

CSU: Contacts of Structural Units for 2V0T

Likely Quarternary Molecular Structure file(s) for 2V0T

Structure Factors (817 Kb)

Retrieve 2V0T in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2V0T from S2C, [Save to disk]

Re-refined 2v0t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V0T in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v0t_A] [2v0t] [2v0t_B] [2v0t_C] [2v0t_D] [2v0t_E] [2v0t_F] [2v0t_G] [2v0t_H]

SWISS-PROT database: [P04789]

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