2V7D Signaling Protein date Jul 30, 2007
title 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated In Beta2 Peptide
authors H.Takala, J.Ylanne
compound source
Molecule: 14-3-3 Protein Zetadelta
Chain: A, B, C, D
Synonym: Protein Kinase C Inhibitor Protein 1, Kcip-1, Fact Activating Exoenzyme S, Fas;
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet-15b

Molecule: Integrin Beta Chain, Beta 2 Variant
Chain: P, Q, R, S
Fragment: Integrin Cytoplasmic Tail, Residues 755-764
Synonym: Thr758 Phophorylated Beta2 Integrin Peptide
Engineered: Yes
Other_details: Thr758 Side Chain Phosphorylated

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 65
R_factor 0.228 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.920 94.920 233.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceIntegrin {beta}2 phosphorylation on THR758 acts as a molecular switch to regulate 14-3-3 and filamin binding., Takala H, Nurminen E, Nurmi SM, Aatonen M, Strandin T, Takatalo M, Kiema T, Gahmberg CG, Ylanne J, Fagerholm SC, Blood. 2008 Jun 12;. PMID:18550856
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk]
  • Biological Unit Coordinates (2v7d.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (2v7d.pdb2.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 2V7D
  • CSU: Contacts of Structural Units for 2V7D
  • Likely Quarternary Molecular Structure file(s) for 2V7D
  • Structure Factors (315 Kb)
  • Retrieve 2V7D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V7D from S2C, [Save to disk]
  • Re-refined 2v7d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V7D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V7D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V7D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v7d_S] [2v7d_R] [2v7d_C] [2v7d_A] [2v7d_D] [2v7d_P] [2v7d_B] [2v7d] [2v7d_Q]
  • SWISS-PROT database: [P63103] [P05107]
  • Domain organization of [1433Z_BOVIN] [ITB2_HUMAN] by SWISSPFAM
  • Domain found in 2V7D: [14_3_3 ] by SMART
  • Other resources with information on 2V7D
  • Community annotation for 2V7D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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