2V8M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GLC, SO4 enzyme
Primary referenceCrystal structures of the starch-binding domain from Rhizopus oryzae glucoamylase reveal a polysaccharide-binding path., Tung JY, Chang MD, Chou WI, Liu YY, Yeh YH, Chang FY, Lin SC, Qiu ZL, Sun YJ, Biochem J. 2008 Nov 15;416(1):27-36. PMID:18588504
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (2v8m.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (2v8m.pdb2.gz) 21 Kb
  • Biological Unit Coordinates (2v8m.pdb3.gz) 21 Kb
  • Biological Unit Coordinates (2v8m.pdb4.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 2V8M
  • CSU: Contacts of Structural Units for 2V8M
  • Likely Quarternary Molecular Structure file(s) for 2V8M
  • Structure Factors (161 Kb)
  • Retrieve 2V8M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V8M from S2C, [Save to disk]
  • Re-refined 2v8m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2V8M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v8m] [2v8m_A] [2v8m_B] [2v8m_C] [2v8m_D]
  • SWISS-PROT database: [P07683]

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