2VDV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SAM enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, F


Primary referenceStructure of the yeast tRNA m7G methylation complex., Leulliot N, Chaillet M, Durand D, Ulryck N, Blondeau K, van Tilbeurgh H, Structure. 2008 Jan;16(1):52-61. PMID:18184583
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (2vdv.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (2vdv.pdb2.gz) 39 Kb
  • Biological Unit Coordinates (2vdv.pdb3.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 2VDV
  • CSU: Contacts of Structural Units for 2VDV
  • Likely Quarternary Molecular Structure file(s) for 2VDV
  • Structure Factors (118 Kb)
  • Retrieve 2VDV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VDV from S2C, [Save to disk]
  • Re-refined 2vdv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VDV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vdv] [2vdv_E] [2vdv_F]
  • SWISS-PROT database: [Q12009]

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