2VKD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MN, UPG	enzyme
Gene Ontology	Chain Function Process Component B, A, C
Primary reference	Conformational Changes and Reaction of Clostridial Glycosylating Toxins., Ziegler MO, Jank T, Aktories K, Schulz GE, J Mol Biol. 2008 Jan 5;. PMID:18325534

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (272 Kb) [Save to disk] Biological Unit Coordinates (2vkd.pdb1.gz) 91 Kb Biological Unit Coordinates (2vkd.pdb2.gz) 92 Kb Biological Unit Coordinates (2vkd.pdb3.gz) 91 Kb LPC: Ligand-Protein Contacts for 2VKD CSU: Contacts of Structural Units for 2VKD Likely Quarternary Molecular Structure file(s) for 2VKD Structure Factors (598 Kb) Retrieve 2VKD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VKD from S2C, [Save to disk] Re-refined 2vkd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VKD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vkd] [2vkd_A] [2vkd_B] [2vkd_C] SWISS-PROT database: [Q46342] Belongs to the clostridial cytotoxin (cct) family according to TCDB.

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