2VL5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceThe crystal structure of the pathogenic collagen type II-specific mouse monoclonal antibody CIIC1 Fab: Structure to function analysis., Uysal H, Sehnert B, Nandakumar KS, Boiers U, Burkhardt H, Holmdahl R, Thunnissen MM, Mol Immunol. 2008 Apr;45(8):2196-204. Epub 2008 Feb 1. PMID:18241923
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk]
  • Biological Unit Coordinates (2vl5.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (2vl5.pdb2.gz) 72 Kb
  • CSU: Contacts of Structural Units for 2VL5
  • Likely Quarternary Molecular Structure file(s) for 2VL5
  • Structure Factors (403 Kb)
  • Retrieve 2VL5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VL5 from S2C, [Save to disk]
  • Re-refined 2vl5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VL5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vl5] [2vl5_A] [2vl5_B] [2vl5_C] [2vl5_D]
  • SWISS-PROT database: [P01863] [P01837] [P01660]
  • Domains found in 2VL5: [IG_like] [IGv ] by SMART

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