2VTU Virus date May 15, 2008
title Crystal Structure Of Bacteriophage Ms2 Covalent Coat Protein
authors P.Plevka, K.Tars, L.Liljas
compound source
Molecule: Ms2 Coat Protein
Chain: J, L
Fragment: Residues 2-130,2 And 4-130
Engineered: Yes
Other_details: Each Chain Comprises A Repeat Unit Containin 2-130 (Pdb Residues 1-129), Residue 2 (Pdb Residue 130) And (Pdb Residues 131-257)
Organism_scientific: Enterobacterio Phage Ms2
Organism_taxid: 12022
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pbad
symmetry Space Group: F 4 3 2
R_factor 0.272 R_Free 0.310
crystal
cell
length a length b length c angle alpha angle beta angle gamma
220.438 220.438 220.438 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.50 Å
Gene
Ontology
ChainFunctionProcessComponent
J, L


Primary referenceCrystal packing of a bacteriophage MS2 coat protein mutant corresponds to octahedral particles., Plevka P, Tars K, Liljas L, Protein Sci. 2008 Jul 28. PMID:18662904
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (2vtu.pdb1.gz) 1663 Kb
  • CSU: Contacts of Structural Units for 2VTU
  • Structure Factors (55 Kb)
  • Retrieve 2VTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VTU from S2C, [Save to disk]
  • View 2VTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2VTU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VTU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vtu_J] [2vtu_L] [2vtu]
  • SWISS-PROT database: [P03612]
  • Domain organization of [COAT_BPMS2] by SWISSPFAM
  • Other resources with information on 2VTU
  • Community annotation for 2VTU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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