2W0O Metal Transport date Aug 20, 2008
title Horse Spleen Apoferritin
authors N.De Val, J.P.Declercq
compound source
Molecule: Ferritin Light Chain
Chain: A
Fragment: Residues 2-175
Synonym: Horse Spleen Apoferritin
Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Organ: Spleen
symmetry Space Group: F 4 3 2
R_factor 0.204 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
182.000 182.000 182.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CD, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural analysis of haemin demetallation by L-chain apoferritins., de Val N, Declercq JP, Lim CK, Crichton RR, J Inorg Biochem. 2012 Mar 9;112C:77-84. PMID:22561545
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (2w0o.pdb1.gz) 754 Kb
  • LPC: Ligand-Protein Contacts for 2W0O
  • CSU: Contacts of Structural Units for 2W0O
  • Likely Quarternary Molecular Structure file(s) for 2W0O
  • Structure Factors (587 Kb)
  • Retrieve 2W0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W0O from S2C, [Save to disk]
  • Re-refined 2w0o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W0O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2W0O, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w0o_A] [2w0o]
  • SWISS-PROT database: [P02791]
  • Domain organization of [FRIL_HORSE] by SWISSPFAM
  • Other resources with information on 2W0O
  • Community annotation for 2W0O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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