2WY3	Immune System Viral Protein	date	Nov 11, 2009
title	Structure Of The Hcmv Ul16-Micb Complex Elucidates Select Bi Viral Immunoevasin To Diverse Nkg2d Ligands
authors	S.Mueller, G.Zocher, A.Steinle, T.Stehle
compound		source
Molecule: Mhc Class I Polypeptide-Related Sequence B Chain: A, C Fragment: Mhc Class I Homolog Domain, Residues 24-341 Synonym: Mhc Class I Polypeptide-Related Sequence B Allele B; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Lung Cell: Fibroblast Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2 Expression_system_plasmid: Pet21a Other_details: Cdna Of Allele 002 Was Isolated From A Imr90 Lung Fibroblast Library;
Molecule: Uncharacterized Protein Ul16 Chain: B, D Fragment: Residues 27-184 Synonym: Ul16 Engineered: Yes		Organism_scientific: Human Herpesvirus 5 Strain Ad169 Organism_taxid: 10360 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029 Expression_system_cell_line: Cho Lec 3.2.8.1 Expression_system_organ: Ovary Expression_system_plasmid: Pcdna3.1(-) Other_details: Cdna Isolated From Hcmv Strain Ad169 Genome.
symmetry	Space Group: P 21 21 21	R_factor 0.177 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.120 104.170 146.800 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	ACT, NAG, PEU	enzyme
note	2WY3 is a representative structure
Primary reference	Structure of the HCMV UL16-MICB complex elucidates select binding of a viral immunoevasin to diverse NKG2D ligands., Muller S, Zocher G, Steinle A, Stehle T, PLoS Pathog. 2010 Jan 15;6(1):e1000723. PMID:20090832

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk] Biological Unit Coordinates (2wy3.pdb1.gz) 117 Kb Biological Unit Coordinates (2wy3.pdb2.gz) 113 Kb LPC: Ligand-Protein Contacts for 2WY3 CSU: Contacts of Structural Units for 2WY3 Structure Factors (605 Kb) Retrieve 2WY3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WY3 from S2C, [Save to disk] Re-refined 2wy3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WY3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WY3

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WY3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wy3_A] [2wy3_C] [2wy3_B] [2wy3] [2wy3_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2WY3: [IGc1 ] by SMART

Other resources with information on 2WY3

Community annotation for 2WY3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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