2Y1V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE, NI enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, A


Primary referenceThe full-length Streptococcus pneumoniae major pilin RrgB crystallizes in a fiber-like structure, which presents the D1 isopeptide bond and provides details on the mechanism of pilus polymerization., El Mortaji L, Contreras-Martel C, Moschioni M, Ferlenghi I, Manzano C, Vernet T, Dessen A, DI Guilmi AM, Biochem J. 2011 Oct 21. PMID:22013894
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (573 Kb) [Save to disk]
  • Biological Unit Coordinates (2y1v.pdb1.gz) 192 Kb
  • Biological Unit Coordinates (2y1v.pdb2.gz) 192 Kb
  • Biological Unit Coordinates (2y1v.pdb3.gz) 193 Kb
  • LPC: Ligand-Protein Contacts for 2Y1V
  • CSU: Contacts of Structural Units for 2Y1V
  • Structure Factors (1111 Kb)
  • Retrieve 2Y1V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y1V from S2C, [Save to disk]
  • Re-refined 2y1v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Y1V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y1v] [2y1v_A] [2y1v_B] [2y1v_C]
  • SWISS-PROT database:

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