2Y8L date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, AMP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


E


Primary referenceStructure of mammalian AMPK and its regulation by ADP., Xiao B, Sanders MJ, Underwood E, Heath R, Mayer FV, Carmena D, Jing C, Walker PA, Eccleston JF, Haire LF, Saiu P, Howell SA, Aasland R, Martin SR, Carling D, Gamblin SJ, Nature. 2011 Apr 14;472(7342):230-3. Epub 2011 Mar 13. PMID:21399626
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk]
  • Biological Unit Coordinates (2y8l.pdb1.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 2Y8L
  • CSU: Contacts of Structural Units for 2Y8L
  • Structure Factors (194 Kb)
  • Retrieve 2Y8L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y8L from S2C, [Save to disk]
  • Re-refined 2y8l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2Y8L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y8l] [2y8l_A] [2y8l_B] [2y8l_E]
  • SWISS-PROT database:
  • Domains found in 2Y8L: [AMPKBI] [CBS ] by SMART

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