2YJP	Transport Protein	date	May 23, 2011
title	Crystal Structure Of The Solute Receptors For L-Cysteine Of Gonorrhoeae
authors	H.Bulut, S.Moniot, F.Scheffel, S.Gathmann, A.Licht, W.Saenger, E.S
compound		source
Molecule: Putative Abc Transporter, Periplasmic Binding Pro Amino Acid; Chain: A, B, C Fragment: Residues 18-284 Synonym: Solute Receptors For L-Cysteine Engineered: Yes Mutation: Yes		Organism_scientific: Neisseria Gonorrhoeae Organism_taxid: 242231 Strain: Fa 1090 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Star Plyss Expression_system_vector_type: Plasmid Expression_system_vector: Pet19b
symmetry	Space Group: P 21 21 21	R_factor 0.185 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.710 91.590 158.300 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.26 Å
ligand	CYS, EDO, ZN	enzyme
Primary reference	Crystal Structures of Two Solute Receptors for l-Cystine and l-Cysteine, Respectively, of the Human Pathogen Neisseria gonorrhoeae., Bulut H, Moniot S, Licht A, Scheffel F, Gathmann S, Saenger W, Schneider E, J Mol Biol. 2012 Jan 20;415(3):560-72. Epub 2011 Nov 23. PMID:22138345

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk] Biological Unit Coordinates (2yjp.pdb1.gz) 81 Kb Biological Unit Coordinates (2yjp.pdb2.gz) 80 Kb Biological Unit Coordinates (2yjp.pdb3.gz) 81 Kb LPC: Ligand-Protein Contacts for 2YJP CSU: Contacts of Structural Units for 2YJP Structure Factors (315 Kb) Retrieve 2YJP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YJP from S2C, [Save to disk] Re-refined 2yjp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YJP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2YJP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2YJP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yjp] [2yjp_A] [2yjp_C] [2yjp_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2YJP: [PBPb ] by SMART

Other resources with information on 2YJP

Community annotation for 2YJP at PDBWiki (http://pdbwiki.org)

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