2ZJB	Recombination	date	Mar 02, 2008
title	Crystal Structure Of The Human Dmc1-M200v Polymorphic Varian
authors	J.Hikiba, K.Hirota, W.Kagawa, S.Ikawa, T.Kinebuchi, I.Sakane, Y.Ta S.Yokoyama, B.Mandon-Pepin, A.Nicolas, T.Shibata, K.Ohta, H.Kuru
compound		source
Molecule: Meiotic Recombination Protein Dmc1lim15 Homolog Chain: A, B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dmc1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-15b
symmetry	Space Group: I 4 2 2	R_factor 0.294 R_Free 0.351
crystal cell	length a length b length c angle alpha angle beta angle gamma 124.089 124.089 217.870 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.50 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural and functional analyses of the DMC1-M200V polymorphism found in the human population., Hikiba J, Hirota K, Kagawa W, Ikawa S, Kinebuchi T, Sakane I, Takizawa Y, Yokoyama S, Mandon-Pepin B, Nicolas A, Shibata T, Ohta K, Kurumizaka H, Nucleic Acids Res. 2008 Jul;36(12):4181-90. Epub 2008 Jun 19. PMID:18566005

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk] Biological Unit Coordinates (2zjb.pdb1.gz) 297 Kb CSU: Contacts of Structural Units for 2ZJB Likely Quarternary Molecular Structure file(s) for 2ZJB Structure Factors (102 Kb) Retrieve 2ZJB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ZJB from S2C, [Save to disk] Re-refined 2zjb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ZJB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ZJB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ZJB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2zjb_A] [2zjb] [2zjb_B] SWISS-PROT database: [Q14565] Domain organization of [DMC1_HUMAN] by SWISSPFAM Domain found in 2ZJB: [AAA ] by SMART

Other resources with information on 2ZJB

Community annotation for 2ZJB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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