3BD9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand A3P enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEngineering sulfotransferases to modify heparan sulfate., Xu D, Moon AF, Song D, Pedersen LC, Liu J, Nat Chem Biol. 2008 Mar;4(3):200-2. Epub 2008 Jan 27. PMID:18223645
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (3bd9.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 3BD9
  • CSU: Contacts of Structural Units for 3BD9
  • Likely Quarternary Molecular Structure file(s) for 3BD9
  • Structure Factors (180 Kb)
  • Retrieve 3BD9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BD9 from S2C, [Save to disk]
  • Re-refined 3bd9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BD9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bd9] [3bd9_A]
  • SWISS-PROT database: [Q8IZT8]

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