3BOD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Primary referenceCrystal Structures of beta-Neurexin 1 and beta-Neurexin 2 Ectodomains and Dynamics of Splice Insertion Sequence 4., Koehnke J, Jin X, Trbovic N, Katsamba PS, Brasch J, Ahlsen G, Scheiffele P, Honig B, Palmer AG 3rd, Shapiro L, Structure. 2008 Mar;16(3):410-21. PMID:18334216
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (3bod.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 3BOD
  • CSU: Contacts of Structural Units for 3BOD
  • Likely Quarternary Molecular Structure file(s) for 3BOD
  • Structure Factors (497 Kb)
  • Retrieve 3BOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BOD from S2C, [Save to disk]
  • Re-refined 3bod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3BOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bod] [3bod_A]
  • SWISS-PROT database: [Q9CS84]
  • Domain found in 3BOD: [LamG ] by SMART

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