3D39		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, PFF	enzyme
Gene Ontology	Chain Function Process Component B cellular response to iron io...
Primary reference	Fluorine substitutions in an antigenic peptide selectively modulate T-cell receptor binding in a minimally perturbing manner., Piepenbrink KH, Borbulevych OY, Sommese RF, Clemens J, Armstrong KM, Desmond C, Do P, Baker BM, Biochem J. 2009 Oct 12;423(3):353-61. PMID:19698083

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk] Biological Unit Coordinates (3d39.pdb1.gz) 132 Kb LPC: Ligand-Protein Contacts for 3D39 CSU: Contacts of Structural Units for 3D39 Likely Quarternary Molecular Structure file(s) for 3D39 Structure Factors (341 Kb) Retrieve 3D39 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D39 from S2C, [Save to disk] Re-refined 3d39 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D39 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d39] [3d39_A] [3d39_B] [3d39_C] [3d39_D] [3d39_E] SWISS-PROT database: [P01892] [P61769] Domains found in 3D39: [IG_like] [IGc1] [IGv ] by SMART

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