3D3M		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
note	3D3M is a representative structure
Primary reference	The Crystal Structure of the C-Terminal DAP5/p97 Domain Sheds Light on the Molecular Basis for Its Processing by Caspase Cleavage., Liberman N, Dym O, Unger T, Albeck S, Peleg Y, Jacobovitch Y, Branzburg A, Eisenstein M, Marash L, Kimchi A, J Mol Biol. 2008 Aug 12. PMID:18722383

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (3d3m.pdb1.gz) 28 Kb Biological Unit Coordinates (3d3m.pdb2.gz) 27 Kb CSU: Contacts of Structural Units for 3D3M Likely Quarternary Molecular Structure file(s) for 3D3M Structure Factors (446 Kb) Retrieve 3D3M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D3M from S2C, [Save to disk] Re-refined 3d3m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D3M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d3m] [3d3m_A] [3d3m_B] SWISS-PROT database: [P78344] Domain found in 3D3M: [eIF5C ] by SMART

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