3DJ5 Transferase date Jun 22, 2008
title Crystal Structure Of The Mouse Aurora-A Catalytic Domain (As Lys240->Arg, Met302->Leu) In Complex With Compound 290.
authors R.A.Elling, D.A.Erlanson, W.Yang, B.T.Tangonan, S.K.Hansen, M.J.R
compound source
Molecule: Serinethreonine Kinase 6
Chain: A
Fragment: Aurora A Kinase Domain, Unp Residues 116-382
Synonym: Aurora-A Kinase
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Aurka, Stk6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Star Codon+
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p-1
symmetry Space Group: P 32 2 1
R_factor 0.207 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.738 97.738 62.224 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand AK5 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (3dj5.pdb1.gz) 97 Kb
  • Biological Unit Coordinates (3dj5.pdb2.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 3DJ5
  • CSU: Contacts of Structural Units for 3DJ5
  • Likely Quarternary Molecular Structure file(s) for 3DJ5
  • Structure Factors (220 Kb)
  • Retrieve 3DJ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DJ5 from S2C, [Save to disk]
  • Re-refined 3dj5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DJ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3DJ5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3DJ5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dj5_A] [3dj5]
  • SWISS-PROT database: [P97477]
  • Domain organization of [STK6_MOUSE] by SWISSPFAM
  • Domain found in 3DJ5: [S_TKc ] by SMART
  • Other resources with information on 3DJ5
  • Community annotation for 3DJ5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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