3DYT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MSE, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structure and plasticity of Endophilin and Sorting Nexin 9., Wang Q, Kaan HY, Hooda RN, Goh SL, Sondermann H, Structure. 2008 Oct 8;16(10):1574-87. PMID:18940612

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (3dyt.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 3DYT CSU: Contacts of Structural Units for 3DYT Likely Quarternary Molecular Structure file(s) for 3DYT Structure Factors (470 Kb) Retrieve 3DYT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DYT from S2C, [Save to disk] Re-refined 3dyt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DYT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dyt] [3dyt_A] SWISS-PROT database: [Q9Y5X1] Domain found in 3DYT: [PX ] by SMART

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