3DZD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, MSE, NA enzyme
Gene AQ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and Regulatory Mechanism of Aquifex aeolicus NtrC4: Variability and Evolution in Bacterial Transcriptional Regulation., Batchelor JD, Doucleff M, Lee CJ, Matsubara K, De Carlo S, Heideker J, Lamers MH, Pelton JG, Wemmer DE, J Mol Biol. 2008 Oct 17. PMID:18955063
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk]
  • Biological Unit Coordinates (3dzd.pdb1.gz) 251 Kb
  • LPC: Ligand-Protein Contacts for 3DZD
  • CSU: Contacts of Structural Units for 3DZD
  • Likely Quarternary Molecular Structure file(s) for 3DZD
  • Structure Factors (342 Kb)
  • Retrieve 3DZD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DZD from S2C, [Save to disk]
  • Re-refined 3dzd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DZD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dzd] [3dzd_A] [3dzd_B]
  • SWISS-PROT database: [O66551]
  • Domains found in 3DZD: [AAA] [REC ] by SMART

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