3EBB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, MSE	enzyme
Gene Ontology	Chain Function Process Component A, C, B, D
Primary reference	Structure and function of the PLAA/Ufd3-p97/Cdc48 complex., Qiu L, Pashkova N, Walker JR, Winistorfer S, Allali-Hassani A, Akutsu M, Piper R, Dhe-Paganon S, J Biol Chem. 2010 Jan 1;285(1):365-72. Epub 2009 Nov 2. PMID:19887378

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (354 Kb) [Save to disk] Biological Unit Coordinates (3ebb.pdb1.gz) 172 Kb Biological Unit Coordinates (3ebb.pdb2.gz) 171 Kb LPC: Ligand-Protein Contacts for 3EBB CSU: Contacts of Structural Units for 3EBB Likely Quarternary Molecular Structure file(s) for 3EBB Structure Factors (1247 Kb) Retrieve 3EBB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3EBB from S2C, [Save to disk] Re-refined 3ebb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3EBB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ebb] [3ebb_A] [3ebb_B] [3ebb_C] [3ebb_D] [3ebb_E] [3ebb_F] [3ebb_G] [3ebb_H] SWISS-PROT database: [Q9Y263] [P55072] Belongs to the endoplasmic reticular retrotranslocon (er-rt) family according to TCDB.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---