3F5M	Transferase	date	Nov 04, 2008
title	Crystal Structure Of Atp-Bound Phosphofructokinase From Tryp Brucei
authors	I.W.Mcnae, J.Martinez-Oyanedel, J.W.Keillor, P.A.M.Michels, L.A.Fothergill-Gilmore, M.D.Walkinshaw
compound		source
Molecule: 6-Phospho-1-Fructokinase (Atp-Dependent Phosphofructokinase); Chain: A, B, C, D Ec: 2.7.1.11 Engineered: Yes		Organism_scientific: Trypanosoma Brucei Organism_taxid: 5691 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
symmetry	Space Group: P 21 21 21	R_factor 0.224 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 96.578 117.570 176.587 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	ATP, GOL, MG, NA, SO4	enzyme	Transferase E.C.2.7.1.11 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B 6-phosphofructokinase activi... glycosome
Primary reference	The crystal structure of ATP-bound phosphofructokinase from Trypanosoma brucei reveals conformational transitions different from those of other phosphofructokinases., McNae IW, Martinez-Oyanedel J, Keillor JW, Michels PA, Fothergill-Gilmore LA, Walkinshaw MD, J Mol Biol. 2009 Feb 6;385(5):1519-33. Epub 2008 Dec 3. PMID:19084537

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (308 Kb) [Save to disk] Biological Unit Coordinates (3f5m.pdb1.gz) 300 Kb LPC: Ligand-Protein Contacts for 3F5M CSU: Contacts of Structural Units for 3F5M Likely Quarternary Molecular Structure file(s) for 3F5M Structure Factors (842 Kb) Retrieve 3F5M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3F5M from S2C, [Save to disk] Re-refined 3f5m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F5M in 3D

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Visual 3D analysis of 3F5M

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3F5M, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f5m_C] [3f5m] [3f5m_A] [3f5m_B] [3f5m_D] SWISS-PROT database: [O15648] Domain organization of [O15648_9TRYP] by SWISSPFAM

Other resources with information on 3F5M

Community annotation for 3F5M at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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