3FRV Protein Transport date Jan 08, 2009
title Structure Of Human Chmp3 (Residues 1-150)
authors C.P.Hill, H.L.Schubert, J.Mccullough, W.I.Sundquist
compound source
Molecule: Charged Multivesicular Body Protein 3
Chain: A
Fragment: Unp Residues 1 - 150
Synonym: Chromatin-Modifying Protein 3, Vacuolar Protein-So Associated Protein 24, Hvps24, Neuroendocrine Differentiati
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cgi-149, Chmp3, Nedf, Vps24
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Codon+Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgst
symmetry Space Group: P 61
R_factor 0.435 R_Free 0.375
crystal
cell
length a length b length c angle alpha angle beta angle gamma
111.484 111.484 30.567 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.70 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for ESCRT-III protein autoinhibition., Bajorek M, Schubert HL, McCullough J, Langelier C, Eckert DM, Stubblefield WM, Uter NT, Myszka DG, Hill CP, Sundquist WI, Nat Struct Mol Biol. 2009 Jun 14. PMID:19525971
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (3frv.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 3FRV
  • Likely Quarternary Molecular Structure file(s) for 3FRV
  • Structure Factors (19 Kb)
  • Retrieve 3FRV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FRV from S2C, [Save to disk]
  • Re-refined 3frv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FRV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FRV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FRV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3frv_A] [3frv]
  • SWISS-PROT database: [Q9Y3E7]
  • Domain organization of [CHMP3_HUMAN] by SWISSPFAM
  • Other resources with information on 3FRV
  • Community annotation for 3FRV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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