3GDN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FAD, FUC, HBX, MAN, MXN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSubstrate Binding in the FAD-Dependent Hydroxynitrile Lyase from Almond Provides Insight into the Mechanism of Cyanohydrins Formation and Explains the Absence of Dehydrogenation Activity., Dreveny I, Andryushkova A, Glieder A, Gruber K, Kratky C, Biochemistry. 2009 Mar 3. PMID:19256550
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (197 Kb) [Save to disk]
  • Biological Unit Coordinates (3gdn.pdb1.gz) 97 Kb
  • Biological Unit Coordinates (3gdn.pdb2.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 3GDN
  • CSU: Contacts of Structural Units for 3GDN
  • Likely Quarternary Molecular Structure file(s) for 3GDN
  • Structure Factors (1277 Kb)
  • Retrieve 3GDN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GDN from S2C, [Save to disk]
  • Re-refined 3gdn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GDN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gdn] [3gdn_A] [3gdn_B]
  • SWISS-PROT database: [Q945K2]

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