3GGG	Oxidoreductase	date	Feb 27, 2009
title	The Crystal Structure Of A. Aeolicus Prephenate Dehydrogenas Complex With Tyrosine And Nad+
authors	W.Sun, D.Shahinas, D.Christendat
compound		source
Molecule: Prephenate Dehydrogenase Chain: D, A, B, C Engineered: Yes		Organism_scientific: Aquifex Aeolicus Organism_taxid: 63363 Strain: Vf5 Gene: Aq_1755, Tyra Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 21 21 21	R_factor 0.193 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 79.431 93.691 163.656 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.21 Å
ligand	NAD, TYR	enzyme
Gene	AQ
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The crystal structure of A. aeolicus prephenate dehydrogenase reveals the mode of tyrosine inhibition., Sun W, Shahinas D, Bonvin J, Hou W, Kimber MS, Turnbull J, Christendat D, J Biol Chem. 2009 Mar 10. PMID:19279014

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk] Biological Unit Coordinates (3ggg.pdb1.gz) 95 Kb Biological Unit Coordinates (3ggg.pdb2.gz) 92 Kb LPC: Ligand-Protein Contacts for 3GGG CSU: Contacts of Structural Units for 3GGG Likely Quarternary Molecular Structure file(s) for 3GGG Structure Factors (926 Kb) Retrieve 3GGG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GGG from S2C, [Save to disk] Re-refined 3ggg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GGG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GGG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GGG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ggg] [3ggg_C] [3ggg_A] [3ggg_D] [3ggg_B] SWISS-PROT database: [O67636] Domain organization of [O67636_AQUAE] by SWISSPFAM

Other resources with information on 3GGG

Community annotation for 3GGG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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