3GJ9	Signaling Protein	date	Mar 08, 2009
title	Crystal Structure Of Tip-1 In Complex With C-Terminal Of Kir
authors	Y.Shen
compound		source
Molecule: Tax1-Binding Protein 3 Chain: A, B Synonym: Tax Interaction Protein 1, Tip-1, Glutaminase-Inte Protein 3; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: C-Terminal Peptide From Inward Rectifier Potassiu 4; Chain: C, D Synonym: C-Terminal Peptide Of Inward Rectifier K(+) Channe Engineered: Yes		Synthetic: Yes Other_details: This Sequence Occurs Naturally In Humans
symmetry	Space Group: P 43 2 2	R_factor 0.247 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.457 86.457 101.517 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	CL, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Molecular mechanism of inward rectifier potassium channel 2.3 regulation by tax-interacting protein-1., Yan X, Zhou H, Zhang J, Shi C, Xie X, Wu Y, Tian C, Shen Y, Long J, J Mol Biol. 2009 Oct 2;392(4):967-76. Epub 2009 Jul 25. PMID:19635485

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk] Biological Unit Coordinates (3gj9.pdb1.gz) 20 Kb Biological Unit Coordinates (3gj9.pdb2.gz) 20 Kb LPC: Ligand-Protein Contacts for 3GJ9 CSU: Contacts of Structural Units for 3GJ9 Structure Factors (121 Kb) Retrieve 3GJ9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GJ9 from S2C, [Save to disk] Re-refined 3gj9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GJ9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GJ9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GJ9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gj9_D] [3gj9] [3gj9_B] [3gj9_C] [3gj9_A] SWISS-PROT database: [P48050] [O14907] Domain organization of [IRK4_HUMAN] [TX1B3_HUMAN] by SWISSPFAM Domain found in 3GJ9: [PDZ ] by SMART

Other resources with information on 3GJ9

Community annotation for 3GJ9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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