3H5V Transport Protein date Apr 22, 2009
title Crystal Structure Of The Glur2-Atd
authors R.Jin, S.K.Singh, S.Gu, H.Furukawa, A.Sobolevsky, J.Zhou, Y.Jin, E.
compound source
Molecule: Glutamate Receptor 2
Chain: A, B, C
Fragment: Unp Residues 21-404
Synonym: Glur-2, Glur-B, Glur-K2, Glutamate Receptor Ionotr 2, Ampa-Selective Glutamate Receptor 2;
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Brown Rat,Rat,Rats
Organism_taxid: 10116
Gene: Gria2, Glur2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 2
R_factor 0.186 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.003 362.993 61.434 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.33 Å
ligand NAG enzyme
Primary referenceCrystal structure and association behaviour of the GluR2 amino-terminal domain., Jin R, Singh SK, Gu S, Furukawa H, Sobolevsky AI, Zhou J, Jin Y, Gouaux E, EMBO J. 2009 May 21. PMID:19461580
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (393 Kb) [Save to disk]
  • Biological Unit Coordinates (3h5v.pdb1.gz) 259 Kb
  • Biological Unit Coordinates (3h5v.pdb2.gz) 256 Kb
  • LPC: Ligand-Protein Contacts for 3H5V
  • CSU: Contacts of Structural Units for 3H5V
  • Likely Quarternary Molecular Structure file(s) for 3H5V
  • Structure Factors (1172 Kb)
  • Retrieve 3H5V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3H5V from S2C, [Save to disk]
  • Re-refined 3h5v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3H5V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3H5V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3H5V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3h5v] [3h5v_B] [3h5v_A] [3h5v_C]
  • SWISS-PROT database: [P19491]
  • Domain organization of [GRIA2_RAT] by SWISSPFAM
  • Other resources with information on 3H5V
  • Community annotation for 3H5V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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