OCA Atlas for 3HBR

3HBR

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

EDO, KCX

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, D, A, C

Primary reference

Crystal structure of the OXA-48 beta-lactamase reveals mechanistic diversity among class D carbapenemases., Docquier JD, Calderone V, De Luca F, Benvenuti M, Giuliani F, Bellucci L, Tafi A, Nordmann P, Botta M, Rossolini GM, Mangani S, Chem Biol. 2009 May 29;16(5):540-7. PMID:19477418

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk]

Biological Unit Coordinates (3hbr.pdb1.gz) 87 Kb

Biological Unit Coordinates (3hbr.pdb2.gz) 86 Kb

Biological Unit Coordinates (3hbr.pdb3.gz) 45 Kb

Biological Unit Coordinates (3hbr.pdb4.gz) 45 Kb

Biological Unit Coordinates (3hbr.pdb5.gz) 45 Kb

Biological Unit Coordinates (3hbr.pdb6.gz) 44 Kb

LPC: Ligand-Protein Contacts for 3HBR

CSU: Contacts of Structural Units for 3HBR

Likely Quarternary Molecular Structure file(s) for 3HBR

Structure Factors (1178 Kb)

Retrieve 3HBR in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3HBR from S2C, [Save to disk]

Re-refined 3hbr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HBR in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hbr] [3hbr_A] [3hbr_B] [3hbr_C] [3hbr_D]

SWISS-PROT database: [Q6XEC0]

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