3J4F date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
E, D, C, A, B, F


Primary referenceMature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics., Zhao G, Perilla JR, Yufenyuy EL, Meng X, Chen B, Ning J, Ahn J, Gronenborn AM, Schulten K, Aiken C, Zhang P, Nature. 2013 May 30;497(7451):643-6. doi: 10.1038/nature12162. PMID:23719463
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk]
  • Biological Unit Coordinates (3j4f.pdb1.gz) 6268 Kb
  • CSU: Contacts of Structural Units for 3J4F
  • Retrieve 3J4F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3J4F from S2C, [Save to disk]
  • View 3J4F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3j4f] [3j4f_A] [3j4f_B] [3j4f_C] [3j4f_D] [3j4f_E] [3j4f_F]
  • SWISS-PROT database:

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