3J5M		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
note	3J5M (Molecule of the Month:pdb169)
Gene Ontology	Chain Function Process Component A, I, E
Primary reference	Cryo-EM Structure of a Fully Glycosylated Soluble Cleaved HIV-1 Envelope Trimer., Lyumkis D, Julien JP, de Val N, Cupo A, Potter CS, Klasse PJ, Burton DR, Sanders RW, Moore JP, Carragher B, Wilson IA, Ward AB, Science. 2013 Oct 31. PMID:24179160

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (351 Kb) [Save to disk] Biological Unit Coordinates (3j5m.pdb1.gz) 344 Kb CSU: Contacts of Structural Units for 3J5M Retrieve 3J5M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3J5M from S2C, [Save to disk]

View 3J5M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3j5m] [3j5m_A] [3j5m_B] [3j5m_C] [3j5m_D] [3j5m_E] [3j5m_F] [3j5m_G] [3j5m_H] [3j5m_I] [3j5m_J] [3j5m_K] [3j5m_L] SWISS-PROT database: Domains found in 3J5M: [IG_like] [IGv ] by SMART

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