OCA Atlas for 3J9Q

3J9Q

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
i, b, S, p, W, r, t, u, c, Y, q, V, k, v, h, U, o, n, f, l, T, s, Z, e
j, M, C, I, d, R, Q, X, G, J, N, L, g, F, D, E, m, B, a, H, P, K, A, O

Primary reference

Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states., Ge P, Scholl D, Leiman PG, Yu X, Miller JF, Zhou ZH, Nat Struct Mol Biol. 2015 Mar 30. doi: 10.1038/nsmb.2995. PMID:25822993

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1836 Kb) [Save to disk]

Biological Unit Coordinates (3j9q.pdb1.gz) 1833 Kb

CSU: Contacts of Structural Units for 3J9Q

Retrieve 3J9Q in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3J9Q from S2C, [Save to disk]

View 3J9Q in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3j9q] [3j9q_A] [3j9q_B] [3j9q_C] [3j9q_D] [3j9q_E] [3j9q_F] [3j9q_G] [3j9q_H] [3j9q_I] [3j9q_J] [3j9q_K] [3j9q_L] [3j9q_M] [3j9q_N] [3j9q_O] [3j9q_P] [3j9q_Q] [3j9q_R] [3j9q_S] [3j9q_T] [3j9q_U] [3j9q_V] [3j9q_W] [3j9q_X] [3j9q_Y] [3j9q_Z] [3j9q_a] [3j9q_b] [3j9q_c] [3j9q_d] [3j9q_e] [3j9q_f] [3j9q_g] [3j9q_h] [3j9q_i] [3j9q_j] [3j9q_k] [3j9q_l] [3j9q_m] [3j9q_n] [3j9q_o] [3j9q_p] [3j9q_q] [3j9q_r] [3j9q_s] [3j9q_t] [3j9q_u] [3j9q_v]

SWISS-PROT database:

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