3JPY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, NA, NAG, ZN enzyme
Primary referenceStructure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit., Karakas E, Simorowski N, Furukawa H, EMBO J. 2009 Nov 12. PMID:19910922
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3jpy.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (3jpy.pdb2.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 3JPY
  • CSU: Contacts of Structural Units for 3JPY
  • Structure Factors (232 Kb)
  • Retrieve 3JPY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JPY from S2C, [Save to disk]
  • Re-refined 3jpy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3JPY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jpy] [3jpy_A]
  • SWISS-PROT database: [Q00960]
  • Belongs to the glutamate-gated ion channel (gic) family of neurotransmitter receptors according to TCDB.

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