OCA Atlas for 3LGP

3LGP

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

50X, ZN BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Structure and activity relationships of tartrate-based TACE inhibitors., Li D, Popovici-Muller J, Belanger DB, Caldwell J, Dai C, David M, Girijavallabhan VM, Lavey BJ, Lee JF, Liu Z, Mazzola R, Rizvi R, Rosner KE, Shankar B, Spitler J, Ting PC, Vaccaro H, Yu W, Zhou G, Zhu Z, Niu X, Sun J, Guo Z, Orth P, Chen S, Kozlowski JA, Lundell DJ, Madison V, McKittrick B, Piwinski JJ, Shih NY, Shipps GW Jr, Siddiqui MA, Strickland CO, Bioorg Med Chem Lett. 2010 Aug 15;20(16):4812-5. Epub 2010 Jun 25. PMID:20638281

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]

Biological Unit Coordinates (3lgp.pdb1.gz) 44 Kb

Biological Unit Coordinates (3lgp.pdb2.gz) 43 Kb

LPC: Ligand-Protein Contacts for 3LGP

CSU: Contacts of Structural Units for 3LGP

Structure Factors (998 Kb)

Retrieve 3LGP in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3LGP from S2C, [Save to disk]

Re-refined 3lgp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LGP in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lgp] [3lgp_A] [3lgp_B]

SWISS-PROT database:

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