3M7V	Isomerase	date	Mar 17, 2010
title	Crystal Structure Of Phosphopentomutase From Streptococcus M
authors	A.A.Fedorov, J.Bonanno, E.V.Fedorov, S.K.Burley, S.C.Almo, New Yo Research Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Phosphopentomutase Chain: A, B Synonym: Phosphodeoxyribomutase Ec: 5.4.2.7 Engineered: Yes		Organism_scientific: Streptococcus Mutans Organism_taxid: 1309 Gene: Deob, Smu_1233 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.181 R_Free 0.211
crystal cell	length a length b length c angle alpha angle beta angle gamma 69.788 63.687 104.765 90.00 98.85 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	GOL, MN	enzyme	Isomerase E.C.5.4.2.7 BRENDA
note	3M7V is a representative structure and supersedes 2I09
Gene	SMU
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (259 Kb) [Save to disk] Biological Unit Coordinates (3m7v.pdb1.gz) 128 Kb Biological Unit Coordinates (3m7v.pdb2.gz) 129 Kb LPC: Ligand-Protein Contacts for 3M7V CSU: Contacts of Structural Units for 3M7V Structure Factors (853 Kb) Retrieve 3M7V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3M7V from S2C, [Save to disk] Re-refined 3m7v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3M7V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3M7V

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3M7V, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3m7v] [3m7v_A] [3m7v_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3M7V

Community annotation for 3M7V at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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