OCA Atlas for 3MN1

3MN1

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

enzyme

Gene

PSPPH

Gene
Ontology

Chain	Function	Process	Component
D, F, I, K, B, L, J, C, H, A, G, E	3-deoxy-manno-octulosonate-8...

Primary reference

Structural Basis for the Divergence of Substrate Specificity and Biological Function within HAD Phosphatases in Lipopolysaccharide and Sialic Acid Biosynthesis., Daughtry KD, Huang H, Malashkevich V, Patskovsky Y, Liu W, Ramagopal U, Sauder JM, Burley SK, Almo SC, Dunaway-Mariano D, Allen KN, Biochemistry. 2013 Aug 13;52(32):5372-86. doi: 10.1021/bi400659k. Epub 2013 Jul, 29. PMID:23848398

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (358 Kb) [Save to disk]

Biological Unit Coordinates (3mn1.pdb1.gz) 124 Kb

Biological Unit Coordinates (3mn1.pdb2.gz) 119 Kb

Biological Unit Coordinates (3mn1.pdb3.gz) 120 Kb

LPC: Ligand-Protein Contacts for 3MN1

CSU: Contacts of Structural Units for 3MN1

Structure Factors (4092 Kb)

Retrieve 3MN1 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3MN1 from S2C, [Save to disk]

Re-refined 3mn1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MN1 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3mn1] [3mn1_A] [3mn1_B] [3mn1_C] [3mn1_D] [3mn1_E] [3mn1_F] [3mn1_G] [3mn1_H] [3mn1_I] [3mn1_J] [3mn1_K] [3mn1_L]

SWISS-PROT database:

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]