3N5F	Hydrolase	date	May 25, 2010
title	Crystal Structure Of L-N-Carbamoylase From Geobacillus Stearothermophilus Cect43
authors	A.Garcia-Pino, S.Martinez-Rodriguez, J.A.Gavira
compound		source
Molecule: N-Carbamoyl-L-Amino Acid Hydrolase Chain: A, B Synonym: L-Carbamoylase Ec: 3.5.1.87 Engineered: Yes		Organism_scientific: Bacillus Stearothermophilus Organism_common: Geobacillus Stearothermophilus Organism_taxid: 1422 Strain: Cect43 Gene: Amab Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22
symmetry	Space Group: P 21 21 2	R_factor 0.193 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 103.208 211.683 43.091 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.75 Å
ligand	CAC, CO, IPA	enzyme	Hydrolase E.C.3.5.1.87 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Mutational and structural analysis of L-N-carbamoylase reveals new insights into a peptidase m20/m25/m40 family member., Martinez-Rodriguez S, Garcia-Pino A, Las Heras-Vazquez FJ, Clemente-Jimenez JM, Rodriguez-Vico F, Garcia-Ruiz JM, Loris R, Gavira JA, J Bacteriol. 2012 Nov;194(21):5759-68. doi: 10.1128/JB.01056-12. Epub 2012 Aug, 17. PMID:22904279

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk] Biological Unit Coordinates (3n5f.pdb1.gz) 122 Kb LPC: Ligand-Protein Contacts for 3N5F CSU: Contacts of Structural Units for 3N5F Structure Factors (390 Kb) Retrieve 3N5F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3N5F from S2C, [Save to disk] Re-refined 3n5f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3N5F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3N5F

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3N5F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3n5f_B] [3n5f] [3n5f_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3N5F

Community annotation for 3N5F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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