3NOY	Oxidoreductase	date	Jun 26, 2010
title	Crystal Structure Of Ispg (Gcpe)
authors	M.Groll, T.Graewert, A.Bacher
compound		source
Molecule: 4-Hydroxy-3-Methylbut-2-En-1-Yl Diphosphate Synth Chain: A, B, C, D Synonym: 1-Hydroxy-2-Methyl-2-(E)-Butenyl 4-Diphosphate Syn Ec: 1.17.7.1 Engineered: Yes		Organism_scientific: Aquifex Aeolicus Organism_taxid: 63363 Gene: Aq_1540, Gcpe, Ispg Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe-30
symmetry	Space Group: C 1 2 1	R_factor 0.221 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 243.700 119.010 63.820 90.00 95.48 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	SF4	enzyme	Oxidoreductase E.C.1.17.7.1 BRENDA
note	3NOY is a representative structure
Gene	AQ
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Biosynthesis of Isoprenoids: Crystal Structure of the [4Fe-4S] Cluster Protein IspG., Lee M, Grawert T, Quitterer F, Rohdich F, Eppinger J, Eisenreich W, Bacher A, Groll M, J Mol Biol. 2010 Oct 7. PMID:20932974

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (403 Kb) [Save to disk] Biological Unit Coordinates (3noy.pdb1.gz) 200 Kb Biological Unit Coordinates (3noy.pdb2.gz) 200 Kb LPC: Ligand-Protein Contacts for 3NOY CSU: Contacts of Structural Units for 3NOY Structure Factors (726 Kb) Retrieve 3NOY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NOY from S2C, [Save to disk] Re-refined 3noy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NOY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NOY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NOY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3noy_C] [3noy_A] [3noy_B] [3noy] [3noy_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3NOY

Community annotation for 3NOY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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