3NXD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BGC, EDO, GAL, GOL, NAG, SIA	enzyme
Gene Ontology	Chain Function Process Component C, D, A, B, E
Primary reference	Structure-function analysis of the human JC polyomavirus establishes the LSTc pentasaccharide as a functional receptor motif., Neu U, Maginnis MS, Palma AS, Stroh LJ, Nelson CD, Feizi T, Atwood WJ, Stehle T, Cell Host Microbe. 2010 Oct 21;8(4):309-19. PMID:20951965

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (229 Kb) [Save to disk] Biological Unit Coordinates (3nxd.pdb1.gz) 222 Kb Biological Unit Coordinates (3nxd.pdb2.gz) 443 Kb LPC: Ligand-Protein Contacts for 3NXD CSU: Contacts of Structural Units for 3NXD Structure Factors (977 Kb) Retrieve 3NXD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NXD from S2C, [Save to disk] Re-refined 3nxd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NXD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nxd] [3nxd_A] [3nxd_B] [3nxd_C] [3nxd_D] [3nxd_E] SWISS-PROT database:

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