3PRY Chaperone date Nov 30, 2010
title Crystal Structure Of The Middle Domain Of Human Hsp90-Beta R 2.3 A Resolution
authors A.Chaikuad, E.Pilka, T.D.Sharpe, C.D.O.Cooper, C.Phillips, G.Berr V.Ayinampudi, O.Fedorov, T.Keates, C.Thangaratnarajah, T.Zimmer M.Vollmar, W.W.Yue, K.H.Che, T.Krojer, J.R.C.Muniz, F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, A.Bullock, Stru Genomics Consortium (Sgc)
compound source
Molecule: Heat Shock Protein Hsp 90-Beta
Chain: A, B, C
Fragment: Middle Domain (Unp Residues 284-543)
Synonym: Hsp 90, Heat Shock 84 Kda, Hsp 84, Hsp84
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsp90ab1, Hsp90b, Hspc2, Hspcb
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)-R3-Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Cthf
symmetry Space Group: P 31
R_factor 0.172 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.710 73.710 149.050 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.28 Å
ligand EDO, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk]
  • Biological Unit Coordinates (3pry.pdb1.gz) 87 Kb
  • Biological Unit Coordinates (3pry.pdb2.gz) 85 Kb
  • Biological Unit Coordinates (3pry.pdb3.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 3PRY
  • CSU: Contacts of Structural Units for 3PRY
  • Structure Factors (631 Kb)
  • Retrieve 3PRY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3PRY from S2C, [Save to disk]
  • Re-refined 3pry structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3PRY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3PRY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3PRY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3pry_B] [3pry] [3pry_C] [3pry_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3PRY
  • Community annotation for 3PRY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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